All talks are in Pacific Time. Schedule subject to change.

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Coffee & Check-In
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Session 1: Gene Regulation
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Opening Remarks
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BANKSY: A Spatial Omics Algorithm that Unifies Cell Type Clustering and Tissue Domain Segmentation
Shyam Prabhakar (Genome Institute of Singapore)
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Break
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Spatial Transcriptomics Identifies Neighbourhoods and Molecular Markers of Alveolar Damage in the Lung for COVID-19 Patients
Martin Hemberg (Brigham and Women's Hospital)
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Landscapes of Human cis-regulatory Elements and Transcription Factor Binding Sites Evolutionarily Constrained in the Mammalian Lineage
Zhiping Weng (UMass Chan Medical School)
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Reception & Poster Session
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Coffee & Check-In
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Session 2: Systems Medicine
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Formatting Biological Big Data to Enable (Personalized) Systems Pharmacology
Patrick Aloy (Institute for Research in Biomedicine)
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TBD
Jimmie Ye (UCSF)
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Break
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Genomics of Cancer
Noam Shomron (TAU)
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Understanding Molecular Complexity for Precision Medicine
Natasa Przulj (ICREA; Barcelona Supercomputing Center; University College Londo…
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Lunch
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Session 3: Machine Learning
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Machine Learning for Single-Cell 3D Epigenomics
Jian Ma (Carnegie Mellon University)
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A Statistical, Reference-Free Algorithm Subsumes Myriad Problems in Genome Science
Julia Salzman (Stanford)
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Break
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Using Large-Scale Clinico-Genomics Data for in silico Clinical Trials and Precision Oncology
James Zou (Stanford University)
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Future Directions in Genomic Discovery
Roded Sharan (TAU), Nadav Ahituv (UCSF)
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Coffee & Check-In
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Session 4: Network Biology
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Interactome Networks in Genetic and Infectious Diseases
Pascal Falter-Braun (Institute of Network Biology - Helmholtz Zentrum Munich)
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Long-Range Propagation of Genetic Effects in Molecular Networks
Andreas Beyer (CECAD, University of Cologne, Germany)
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Break
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A Binary Quantitative Interaction Mapping Approach: Elucidating Multiprotein Complexes in Health and Disease
Erich Wanker (Max Delbrueck Center for Molecular Medicine)
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A Tyrosine Kinase Protein Interaction Map Reveals Targetable EGFR Network Oncogenesis in Lung Cancer
Sourav Bandyopadhyay (UCSF)
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Lunch
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Computational Approaches to Study Interactions Between Mutagenic Processes and Cellular Processes
Teresa Przytycka (National Center for Biotechnology Information)
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Mapping Biological Pathways Using Systematic Genetics and Cell Biology
Brenda Andrews (University of Toronto)
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Coffee & Ride
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Hike in Strawberry Canyon
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Coffee & Check-In
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Session 5: From Genotype to Phenotype
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Algorithms for Inferring Phenotypes from Ancient DNA
Tony Capra (UCSF)
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Predicting the Deleteriousness of Genomic Variants – Big and Small
Martin Kircher (BIH @ Charité / University of Luebeck)
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Break
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How Genome 3D Organization Regulates Alternative Splicing?
Gil Ast (Tel Aviv University)
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Determining the Molecular Intermediates Between Genotype and Phenotype
David Knowles (Columbia University/New York Genome Center)
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Distinct Gene Programs Underpinning ‘Disease Tolerance’ and ‘Resistance’ Against Infections
Irit Gat-Viks (Tel Aviv University)
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Closing Remarks